Author Title [ Type(Desc)] Year
Book Chapter
Thompson JR, Polz M.  2006.  Dynamics of Vibrio populations and their role in environmental nutrient cycles. The Biology of Vibrios.
Thompson JR, Marcelino L.A, Polz M.  2005.  Oceans and Health: Pathogens in the Marine Environment. Diversity, sources, and detection of human bacterial pathogens in the marine environment.
Conference Proceedings
Chua L.HC, Shanahan P., Edmond Y.ML, S. EB, Thompson J.R, Dixon C.C, Kerigan K.B, Nshimyimana J.P., Yeager J.M., Lee L.J et al..  2010.  Dry Weather Bacteria monitoring and variation with land use for Kranji Reservoir catchment, Singapore. 17th Congress of the Asia and Pacific Division of the International Association of Hydraulic Engineering and Research.
Journal Article
Marcelino LA, Backman V, Donaldson A, Steadman C, Thompson JR, Preheim SPacocha, Lien C, Lim E, Veneziano D, Polz MF.  2006.  Accurately quantifying low-abundant targets amid similar sequences by revealing hidden correlations in oligonucleotide microarray data.. Proc Natl Acad Sci U S A. 103(37):13629-34.
Gophna U, Thompson JR, Boucher Y, W Doolittle F.  2006.  Complex histories of genes encoding 3-hydroxy-3-methylglutaryl-CoenzymeA reductase.. Mol Biol Evol. 23(1):168-78.
Nshimyimana JP, Ekklesia E, Shanahan P, Chua LHC, Thompson JR.  2014.  Distribution and abundance of human-specific Bacteroides and relation to traditional indicators in an urban tropical catchment.. J Appl Microbiol.
Thompson JR, Randa MA, Marcelino LA, Tomita-Mitchell A, Lim E, Polz MF.  2004.  Diversity and dynamics of a north atlantic coastal Vibrio community.. Appl Environ Microbiol. 70(7):4103-10.
Luyten YA, Thompson JR, Morrill W, Polz MF, Distel DL.  2006.  Extensive variation in intracellular symbiont community composition among members of a single population of the wood-boring bivalve Lyrodus pedicellatus (Bivalvia: Teredinidae).. Appl Environ Microbiol. 72(1):412-7.
Thompson JR, Pacocha S, Pharino C, Klepac-Ceraj V, Hunt DE, Benoit J, Sarma-Rupavtarm R, Distel DL, Polz MF.  2005.  Genotypic diversity within a natural coastal bacterioplankton population.. Science. 307(5713):1311-3.
Thompson JR, Marcelino LA, Polz MF.  2002.  Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by 'reconditioning PCR'.. Nucleic Acids Res. 30(9):2083-8.
Thompson JR, Rivera HE, Closek CJ, Medina M.  2014.  Microbes in the coral holobiont: partners through evolution, development, and ecological interactions. Frontiers in Infection and Cellular Biology.
Fernando S.C., Wang J., Sparling K, Garcia G., Francine-Filho deMRLRonald, Paranhos R., Thompson F.L., Thompson JR.  2014.  Microbiota of the major South Atlantic reef building coral Mussismilia. Microbial Ecology .
Teske A, Edgcomb V, Rivers AR, Thompson JR, Gomez Ade Vera, Molyneaux SJ, Wirsen CO.  2009.  A molecular and physiological survey of a diverse collection of hydrothermal vent Thermococcus and Pyrococcus isolates.. Extremophiles. 13(6):905-15.
Helbig T.H, Lim J.H, Har J.Y, Fernando S.F, Penn K, Reitzel A., Thompson JR.  Submitted.  Persistence of bacteria in the Nematostella vectensis holobiont: Insights from comparative genomics and gene expression.
Penn K, Wang J, Fernando SC, Thompson JR.  2014.  Secondary metabolite gene expression and interplay of bacterial functions in a tropical freshwater cyanobacterial bloom.. ISME J.
Rattanama P, Srinitiwarawong K, Thompson JR, Pomwised R, Supamattaya K, Vuddhakul V.  2009.  Shrimp pathogenicity, hemolysis, and the presence of hemolysin and TTSS genes in Vibrio harveyi isolated from Thailand.. Dis Aquat Organ. 86(2):113-22.
Rattanama P, Thompson JR, Kongkerd N, Srinitiwarawong K, Vuddhakul V, Mekalanos JJ.  2012.  Sigma E regulators control hemolytic activity and virulence in a shrimp pathogenic Vibrio harveyi.. PLoS One. 7(2):e32523.
Wang Z, Lin B, Mostaghim A, Rubin RA, Glaser ER, Mittraparp-Arthorn P, Thompson JR, Vuddhakul V, Vora GJ.  2013.  Vibrio campbellii hmgA-mediated pyomelanization impairs quorum sensing, virulence, and cellular fitness.. Front Microbiol. 4:379.